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Markers
When Family Tree DNA does the processing to get the results, they look at certain areas of the DNA cell structure called "markers."  These markers (or certain parts of the DNA structure) are labeled with a name, usually beginning with the prefix 'DYS-'., but most of the time, they are just known by 'Marker-'. For example: DYS-390 aka. Marker 390  or DYS-19 aka Marker 19. These numbers are found at the top of the results chart.  This just sets the standard for every testee to give their numerical value for that marker.  Black numbers represent the markers that do not change over a long period of time.  Red numbers markers are more apt to change short term. 

 

Lineage
On the left of the chart, there is a Kit number which gives a link to their ancestral line.  Next is the HAPLO group. Then the Marker numbers for that individual. All that you have to do to understand the chart is see which numbers match. For example: 

Example A:


The numbers match...thus these two testees maybe related, but a upgrade in markers may be necessary.

Example B:


These marker numbers do not match...and these two testees ARE NOT related. Of course some numbers are the same for both testees, but to establish any relation, you need to match up on at least 11/12.

How to see a relation
As you can see from the chart below, if the numbers match up for two or more testees, they are outlined in the same color. But, also notice that the that two markers are different, this could be a very important clue in establishing lineage from one particular line.       


Of course we don't know exactly how they are all related, but we do know that they come from the same family. That is why paper research is still essential in researching- the DNA results will tell you whether or not that paperwork is correct.

Comparisons
Now you're probably wondering: What if I match up with another Doty-Doughty perfectly on the first 12 numbers, but when I compare the rest of my 25 numbers, I only match up 24 out of 25? The more numbers that you have to compare, the more chances you have to NOT match up on one of them. I will describe this below:
Example A:   You and another testee match up perfectly 25 out of 25 the numbers.
Example B:   You and another testee match up 24 out of the 25 numbers. 
Using the examples above, the testees in Example A would be more closely related than Example B, because they have more numbers that match. So by upgrading your test from a 12 to a 37 marker test will give you a better idea of how "closely" related you and that testee are. Most of the Edward Doty line have upgraded to the 37 marker test. It will give us a better idea of which lines are more closely related, because we already know that there is a definite relation, considering that most everyone has matched very close to 37 numbers.

Mutations
We will look for certain patterns in the results that have a Mutation.  A mutation could signify that you have a result of 12 for Marker 439 and the majority of other testees have a result of 11. This is known as a "1-step" mutation, because your number took a step either up or down from the established majority result of 11. (Mutations will be highlighted)  Mutations are expected! They occur over a period of time, and can even be found in a father and son relationship. Some research has even claimed that natural land features or the age of the father at the time of conception aid the progress of mutations

Y-Dna Haplogroups (Haplo) 
The Haplogroups to date are A through T, source ISOOG.ORG
In our group we have E, I, G, and R, presently.

Haplogroup E would appear to have arisen in Northeast Africa, G is primarily a Middle Eastern, Caucasus Region, and Mediterranean, I is a European haplogroup, and R1b is believed to have arisen in southwest Asia and today is most frequently observed in Europe and especially in western Europe.


Backbone Test
A Backbone test determines which haplogroup, or major branch of the Y-DNA tree, your paternal line belongs to, it tests the “backbone” of the tree or the SNPs that determine the major branches.

Deep Clade Test
A haplogroup test will test a single SNP to determine which haplogroup, or major branch of the Y-DNA phylogenetic tree, your paternal line belongs to.  Once your haplogroup is known or predicted, you can use a Deep Clade test to identify the other SNP mutations that occurred in order to find your twig on the Y-DNA tree.

FAQ on DNA